Program of WEBVALLEY 2013

Sunday, June 30

15.30-16.30

Transfer to Castello di Fiemme

Meeting at 15.00 @ FBK, via Santa Croce 77
17.00-19.00

Welcome to Castello di Fiemme

19.00-21.00

Dinner

21.00-...

Free time...

Monday, July 1

10.30-12.00

Introducing the WebValley Team (students and tutors of WebValley 2012) & Lab Opening

Giuseppe Jurman, Claudia Dolci
12.30-14.00

Lunch break

14.00-15.00

Intro to WebValleyNet and Ubuntu Linux I

Gabriele Franch, Michele Filosi, Shamar Droghetti
15.00-16.00

Intro to WebValleyNet and Ubuntu Linux II

Gabriele Franch, Michele Filosi, Shamar Droghetti
16.30-17.30

Intro to collaboration tools: GitHub and Gobby

Roberto Bampi, Shamar Droghetti
18:00-19:00

Intro to web foundamentals

Gabriele Franch, Shamar Droghetti
19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Tuesday, July 2

9.00-11.00

Intro to python and programming A

Roberto Visintainer
11.00-12.00

Intro to GIS and Cartography

Riccardo De Filippi, Claudia Dolci
12.30-14.00

Lunch break

14.00-15.30

QGIS: theory and practice

Riccardo De Filippi, Claudia Dolci, Shamar Droghetti, Martina Calovi
16.00-17.30

Intro to python and programming B: Numpy

Roberto Visintainer
17.45-18.30

Introduction to Complex Networks I : the 6 degree separation

Giuseppe Jurman
18.30-19.00

Free time

19.00-21.00

Dinner break

21.00-...

Intro to Web Technologies: HTML/CSS/JS

Gabriele Franch, Shamar Droghetti

Wednesday, July 3

9.00-11.00

Image processing in Python: PIL practical examples

Daniele Morabito, Marco Mina
11.00-12.00

Image Analysis: filtering

Steven Altschuler & Lani Wu
12.30-14.00

Lunch break

14.00-17.00

Image Analysis: identifying background

Steven Altschuler & Lani Wu
17.00-18.00

Image processing and computer vision in Python - part 1

Marco Mina, Daniele Morabito
18.00-19.00

Free time

19.00-21.00

Dinner break

21.00-...

Thursday, July 4

9.00-11.00

Image Analysis: edge detection

Steven Altschuler & Lani Wu
11.00-12.00

WebValley 2012: The NanoWebGIS

Violetta Toto
12.30-14.00

Lunch break

14.00-15.00

Image Analysis: identifying foreground objects

Steven Altschuler & Lani Wu
15.00-16.00

An Introduction to Machine Learning

Giuseppe Jurman
16.00-18.00

Image processing and computer vision in Python - part 2

Marco Mina, Daniele Morabito
18.00-19.00

Free time

19.00-21.00

Dinner break

21.00-...

Group presentation

Friday, July 5

9.00-9.30

Group presentation

9.30-10.30

Intro to Complex Networks II: graph theory

Giuseppe Jurman
10.30-11.30

Image Analysis: feature extraction

Steven Altschuler & Lani Wu
11.30-12.30

TeamWork on Image Analysis

12.30-14.00

Lunch break

14.00-15.00

Bioimage Software: CellProfiler

Michele Filosi
15.00-17.30

TeamWork on Image Analysis

17.30-18.45

A vision of information processing in embryogenesis and spatial structure development

Leonardo Morsut (TLC- S. Francisco)
19.00-21.00

Dinner break

21.00-...

Group presentation

Saturday, July 6

9.00-10.00

Feature extraction challenge: Students' presentations

10.00-12.30

Virtualization, Cloud Computing & Hadoop

Roberto Flor
12.30-14.30

Lunch break

14.30-16.30

Project Brainstorming and the WebValley 2013 Challenge

The WebValley Team, with Cesare Furlanello, Steven Altschuler, Lani Wu
16.30-19.00

Free time @ WebValleyLab

19.00-21.00

Dinner break

21.15-22.15

Reproducibility & Big Data in scientific research: examples in High Throughput Omics

Cesare Furlanello
22.15...

Free time @ WebValleyLab

Sunday, July 7

9.00-17.00

Excursion: rafting & AcroPark

17.00-19.00

Free time @ WebValleyLab

19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Monday, July 8

9.00-10.30

Project fundamentals: review of NanoWebGIS 2012

The WebValley Team with Cesare Furlanello
10.30-12.30

Django, JSON, and advanced JavaScript

Roberto Bampi, Matteo Poletti
12.30-14.00

Lunch break

14.00-15.30

Algorithms and R

Michele Filosi, Roberto Visintainer
15.30-17.00

Parallel sessions I: Mind Mapping Intro

Marco Mina, Cesare Furlanello
15.30-18.00

Parallel sessions II: Hadoop @ WebValleyLab

Roberto Flor, Roberto Bampi, Matteo Poletti
18.00-19.00

Introduction to Computer Graphics & 3D: WebGL

Marco Mina, Daniele Morabito
19.00-21.00

Dinner break

21.00-...

Tuesday, July 9

9.00-10.30

From Cell to Organism: complexity levels

Anna Alisi, Children Hospital Bambino Gesù Roma
10.30-11.00

MindMap presentation

11.00-12.00

NAFLD definition and pathogenesis

Anna Alisi
12.30-14.00

Lunch break

14.00-15.15

Project Teamwork

14.15-16.30

Molecular Imaging of NAFLD: tasks for WebValley2013

Anna Alisi
16.30-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

Wednesday, July 10

9.00-12.00

Building the map

12.30-14.00

Lunch break

14.00-15.00

Building the map

15.00-17.00

The HepG2 cell model and review of NAFLD tasks:feasibility, data, timeline

Anna Alisi
17.00-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Thursday, July 11

9.00-12.00

Project Teamwork

12.30-14.00

Lunch break

14.00-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Friday, July 12

9.30-11.45

System Microscopy &The Cellular Phenotype DB @ EBI Cambridge

Gabriella Rustici (European Bioinformatics Institute, Cambridge)
11.45-17.00

Lunch break @ "I suoni delle Dolomiti"

17.00-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

EBI initiative on Data Sharing

Gabriella Rustici

Saturday, July 13

9.00-12.00

Project Teamwork

12.30-14.00

Lunch break

14.00-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Sunday, July 14

10.00-12.00

Free time @ WebValleyLab

12.30-14.00

Lunch break

14.00-16.00

Free time @ WebValleyLab

16.00-19.00

Scientific presentation: short course - part I

Andrea Brunello & Giorgio Guzzetta
19.00-21.00

Dinner break

21.00-...

Scientific presentation: short course - part II

Andrea Brunello & Giorgio Guzzetta

Monday, July 15

9.00.12.00

Project Teamwork

12.30-14.00

Lunch break

14.00-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Tuesday, July 16

9.00.12.00

Project Teamwork

12.30-14.00

Lunch break

14.00-18.00

Project Teamwork

18.00-18.45

Clinic for Open Source SW: Licences and best practice for sharing

Maurizio Napolitano, Open Knowledge Foundation & FBK
19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Wednesday, July 17

9.00.12.00

Project Teamwork

12.30-14.00

Lunch break

14.00-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Thursday, July 18

9.00.12.00

Project Teamwork

12.30-14.00

Lunch break

14.00-19.00

Project Teamwork

19.00-21.00

Dinner break

21.00-...

Team Work: Finalizing the presentation

Friday, July 19

9.00-12.00

Team Work: Finalizing the presentation

12.30-14.00

Lunch break

14.00-17.00

Team Work: Finalizing the presentation

17.00-19.00

FINAL PRESENTATION

19.00-21.00

Dinner break

21.00-...

Free time @ WebValleyLab

Saturday, July 20

9.00-12.00

Closing the WebValleyLab

12.30-15.00

Lunch break

15.00-16.30

Transfer to Trento